BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030E11SP1|AL429242
(918 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1536 1779 0.0
>3x_Contig1536
Length = 11572
Score = 1779 bits (894), Expect = 0.0
Identities = 913/920 (99%), Gaps = 2/920 (0%)
Strand = Plus / Minus
Query: 1 aaaactttatttgagatttgagatctacctaataaacaagaaggaatggtagccaaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1834 aaaactttatttgagatttgagatctacctaataaacaagaaggaatggtagccaaaaaa 1775
Query: 61 gaacggcaaatccggctggctgaacatagtacaaagaattgtagagcattggtcattata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1774 gaacggcaaatccggctggctgaacatagtacaaagaattgtagagcattggtcattata 1715
Query: 121 aaamttgcttggtagagttacattggtcctagcccctcctttagaattaagatgagactt 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1714 aaaattgcttggtagagttacattggtcctagcccctcctttagaattaagatgagactt 1655
Query: 181 tggttattagcatttatcttgggacttttatgccattcgacaaatgcttcatccttatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1654 tggttattagcatttatcttgggacttttatgccattcgacaaatgcttcatccttatca 1595
Query: 241 attgaggaagtatcacagtatagagatcaagatggtatagttatagtcaacgatgataat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1594 attgaggaagtatcacagtatagagatcaagatggtatagttatagtcaacgatgataat 1535
Query: 301 tatgagcgtttcggtaagggactacgagagttttattccgtggtattcataacaagcgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1534 tatgagcgtttcggtaagggactacgagagttttattccgtggtattcataacaagcgac 1475
Query: 361 aaaccaaacagcggcggagagacctgcgatctctgtaaagaattcgaaccaaatatgaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1474 aaaccaaacagcggcggagagacctgcgatctctgtaaagaattcgaaccaaatatgaga 1415
Query: 421 tctgtatcaaggtctattttaaatcaacttccaaaggatcaaagtgacagaatagtcttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1414 tctgtatcaaggtctattttaaatcaacttccaaaggatcaaagtgacagaatagtcttt 1355
Query: 481 ttcaaagtcgatttggcctacaatcctatttttttaaaggaattccaagtcaccaagata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1354 ttcaaagtcgatttggcctacaatcctatttttttaaaggaattccaagtcaccaagata 1295
Query: 541 ccgttctgtttagtatatccaccacaactggaagtgggagcagacggtcaagattttgga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1294 ccgttctgtttagtatatccaccacaactggaagtgggagcagacggtcaagattttgga 1235
Query: 601 tggaagcacagcgttttctatcaatatgttatcagamaagagaatatgaagcagcctatt 660
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1234 tggaagcacagcgttttctatcaatatgttatcagaaaagagaatatgaagcagcctatt 1175
Query: 661 cattttggtgattttttggcaaagatattgaacgttttcatatcaattgatgaaagattc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1174 cattttggtgattttttggcaaagatattgaacgttttcatatcaattgatgaaagattc 1115
Query: 721 gaatacgacaagttcatacaggcattttgtttgtttgtggtcgtgtttgtggttttcaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1114 gaatacgacaagttcatacaggcattttgtttgtttgtggtcgtgtttgtggttttcaaa 1055
Query: 781 aagaaaatcttgccattgattgaaaac-aamctcgattctttctaggatgtgcttycatc 839
||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||
Sbjct: 1054 aagaaaatcttgccattgattgaaaacaaacctcgattctttctaggatgtgcttccatc 995
Query: 840 gcaatcataatgatttctatctccggctacaattttacttccatcaaacatattcctttt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 994 gcaatcataatgatttctatctccggctacaattttacttccatcaaacatattcctttt 935
Query: 900 attgcmc-agatgataaggg 918
||||| | ||||||||||||
Sbjct: 934 attgcacaagatgataaggg 915
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7579
Number of Sequences: 1807
Number of extensions: 7579
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 918
length of database: 10,358,551
effective HSP length: 16
effective length of query: 902
effective length of database: 10,329,639
effective search space: 9317334378
effective search space used: 9317334378
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)